Research publications

Clinical trials of antiretroviral treatment interruption in HIV-infected individuals

Lau, JSY; Smith, MZ; Lewin, SR; McMahon, JH

(2019), AIDS, 773-791

DOI: 10.1097/QAD.0000000000002113

HIV latency can be established in proliferating and nonproliferating resting CD4(+) T cells in vitro: implications for latency reversal

Moso, MA; Anderson, JL; Adikari, S; Gray, LR; Khoury, G; Chang, JJ; Jacobson, JC; Ellet, AM; Chen, WJ; Saleh, S; Zaunders, JJ; Purcell, DFJ; Camerona, PU; Churchill, MJ; Lewin, SR; Lu, HK

(2019), AIDS, 199-209

DOI: 10.1097/QAD.0000000000002075

Towards Genotype-Specific Care for Chronic Hepatitis B: The First 6 Years Follow Up From the CHARM Cohort Study

Davies, J; Smith, EL; Littlejohn, M; Edwards, R; Sozzi, V; Jackson, K; McGuire, K; Binks, P; Cowie, BC; Locarnini, S; Davis, JS; Tong, SYC

(2019), OPEN FORUM INFECTIOUS DISEASES

DOI: 10.1093/ofid/ofz469

Risk of Subsequent HIV Infection Following Sexually Transmissible Infections Among Men Who Have Sex With Men

Harney, BL; Agius, PA; El-Hayek, C; Fairley, CK; Chow, EPF; Roth, N; Tee, BK; Leslie, D; Tachedjian, G; Hellard, M; Stoove, M

(2019), OPEN FORUM INFECTIOUS DISEASES

DOI: 10.1093/ofid/ofz376

Tracing Ancient Human Migrations into Sahul Using Hepatitis B Virus Genomes

Yuen, LKW; Littlejohn, M; Duchene, S; Edwards, R; Bukulatjpi, S; Binks, P; Jackson, K; Davies, J; Davis, JS; Tong, SYC; Locarnini, S

(2019), MOLECULAR BIOLOGY AND EVOLUTION, 942-954

DOI: 10.1093/molbev/msz021

Sex-Based Differences in Human Immunodeficiency Virus Type 1 Reservoir Activity and Residual Immune Activation

Scully, EP; Gandhi, M; Johnston, R; Hoh, R; Lockhart, A; Dobrowolski, C; Pagliuzza, A; Milush, JM; Baker, CA; Girling, V; Ellefson, A; Gorelick, R; Lifson, J; Altfeld, M; Alter, G; Cedars, M; Solomon, A; Lewin, SR; Karn, J; Chomont, N; Bacchetti, P; Deeks, SG

(2019), JOURNAL OF INFECTIOUS DISEASES, 1084-1094

DOI: 10.1093/infdis/jiy617

Impact of Hepatitis B Virus Coinfection on Human T-Lymphotropic Virus Type 1 Clonality in an Indigenous Population of Central Australia

Turpin, J; Yurick, D; Khoury, G; Pham, H; Locarnini, S; Melamed, A; Witkover, A; Wilson, K; Purcell, D; Bangham, CRM; Einsiedel, L

(2019), JOURNAL OF INFECTIOUS DISEASES, 562-567

DOI: 10.1093/infdis/jiy546

Association Between Plasma Antibody Responses and Risk for Cryptococcus-Associated Immune Reconstitution Inflammatory Syndrome

Yoon, HA; Nakouzi, A; Chang, CC; Kuniholm, MH; Carreno, LJ; Wang, T; Ndung'u, T; Lewin, SR; French, MA; Pirofski, LA

(2019), JOURNAL OF INFECTIOUS DISEASES, 420-428

DOI: 10.1093/infdis/jiy447

FDG-PET/CT in managing infection in patients with hematological malignancy: clinician knowledge and experience in Australia

Douglas, AP; Thursky, KA; Worth, LJ; Harrison, SJ; Hicks, RJ; Slavin, MA

(2019), LEUKEMIA & LYMPHOMA, 2471-2476

DOI: 10.1080/10428194.2019.1590571

Estimating the syphilis epidemic among gay, bisexual and other men who have sex with men in Australia following changes in HIV care and prevention

Wilkinson, AL; Scott, N; Tidhar, T; Luong, P; El-Hayek, C; Wilson, DP; Fairley, CK; Zhang, L; Leslie, D; Roth, N; Tee, BK; Hellard, M; Stoove, M

(2019), SEXUAL HEALTH, 254-262

DOI: 10.1071/SH18215

Tracking the uptake of outcomes of hepatitis B virus testing using laboratory data in Victoria, 2011-16: a population-level cohort study

van Gemert, C; Dimech, W; Stoove, M; Guy, R; Howell, J; Bowden, S; Nicholson, S; Pendle, S; Donovan, B; Hellard, M; El-Hayek, C; Callandar, D; Asselin, J; Moreira, C; Smith, LW; Nguyen, L; Thomas, G

(2019), SEXUAL HEALTH, 358-366

DOI: 10.1071/SH18102

Insights From Deep Sequencing of the HBV Genome-Unique, Tiny, and Misunderstood

McNaughton, AL; D'Arienzo, V; Ansari, MA; Lumley, SF; Littlejohn, M; Revill, P; McKeating, JA; Matthews, PC

(2019), GASTROENTEROLOGY, 384-399

DOI: 10.1053/j.gastro.2018.07.058

Unraveling the role of the MOV10 RNA helicase during influenza A virus infection

Villalon-Letelier, F; Reading, PC

(2019), BIOCHEMICAL JOURNAL, 1005-1008

DOI: 10.1042/BCJ20190018

Evolutionary analysis of human parechovirus type 3 and clinical outcomes of infection during the 2017-18 Australian epidemic

Chamings, A; Druce, J; Caly, L; Yoga, Y; Britton, PN; Macartney, KK; Alexandersen, S

(2019), SCIENTIFIC REPORTS

DOI: 10.1038/s41598-019-45445-z

Functional cure of HIV: the scale of the challenge

Davenport, MP; Khoury, DS; Cromer, D; Lewin, SR; Kelleher, AD; Kent, SJ

(2019), NATURE REVIEWS IMMUNOLOGY, 45-54

DOI: 10.1038/s41577-018-0085-4

Neuraminidase escape attempts

Fox, A; Carolan, L

(2019), NATURE MICROBIOLOGY, 2031-2032

DOI: 10.1038/s41564-019-0615-2

PD-1 blockade potentiates HIV latency reversal ex vivo in CD4(+) T cells from ART-suppressed individuals

Fromentin, R; DaFonseca, S; Costiniuk, CT; El-Far, M; Procopio, FA; Hecht, FM; Hoh, R; Deeks, SG; Hazuda, DJ; Lewin, SR; Routy, JP; Sekaly, RP; Chomont, N

(2019), NATURE COMMUNICATIONS

DOI: 10.1038/s41467-019-08798-7

Identification of 5-Substituted 2-Acylaminothiazoles That Activate Tat-Mediated Transcription in HIV-1 Latency Models

Nguyen, W; Jacobson, J; Jarman, KE; Sabroux, HJ; Harty, L; McMahon, J; Lewin, SR; Purcell, DF; Sleebs, BE

(2019), JOURNAL OF MEDICINAL CHEMISTRY, 5148-5175

DOI: 10.1021/acs.jmedchem.9b00462

Using routine testing data to understand circulation patterns of influenza A, respiratory syncytial virus and other respiratory viruses in Victoria, Australia

Price, OH; Sullivan, SG; Sutterby, C; Druce, J; Carville, KS

(2019), EPIDEMIOLOGY AND INFECTION

DOI: 10.1017/S0950268819001055

Prior exposure to immunogenic peptides found in human influenza A viruses may influence the age distribution of cases with avian influenza H5N1 and H7N9 virus infections

Komadina, N; Sullivan, SG; Kedzierska, K; Quinones-Parra, SM; Leder, K; McVernon, J

(2019), EPIDEMIOLOGY AND INFECTION

DOI: 10.1017/S095026881900102X

A global scientific strategy to cure hepatitis B

Revill, PA; Chisari, FV; Block, JM; Dandri, M; Gehring, AJ; Guo, H; Hu, J; Kramvis, A; Lampertico, P; Janssen, HLA; Levrero, M; Li, W; Liang, TJ; Lim, SG; Lu, F; Penicaud, MC; Tavis, JE; Thimme, R; Zoulim, F

(2019), LANCET GASTROENTEROLOGY & HEPATOLOGY, 545-558

DOI: 10.1016/S2468-1253(19)30119-0

Is differential access to prevention distorting HIV epidemiology in Australia?

Medland, NA; Chibo, D; Chow, EPF; Guy, RJ; Fairley, CK

(2019), LANCET HIV, E492-E492

DOI: 10.1016/S2352-3018(19)30225-5

Statistical analysis of single-copy assays when some observations are zero

Bacchetti, P; Bosch, RJ; Scully, EP; Deng, XT; Busch, MP; Deeks, SG; Lewin, SR

(2019), JOURNAL OF VIRUS ERADICATION, 167-173

DOI: 10.1016/S2055-6640(20)30047-9

Reducing the melioidosis burden: public health, chronic disease prevention, or improved case management?

Gibney, KB; Cheng, AC

(2019), LANCET INFECTIOUS DISEASES, 800-802

DOI: 10.1016/S1473-3099(19)30303-2

Intraseason decline in influenza vaccine effectiveness during the 2016 southern hemisphere influenza season: A test-negative design study and phylogenetic assessment

Regan, AK; Fielding, JE; Chilver, MB; Carville, KS; Minney-Smith, CA; Grant, KA; Thomson, C; Hahesy, T; Deng, YM; Stocks, N; Sullivan, SG

(2019), VACCINE, 2634-2641

DOI: 10.1016/j.vaccine.2019.02.027

Hepatitis B virus-like particles expressing Plasmodium falciparum epitopes induce complement-fixing antibodies against the circumsporozoite protein

Kingston, NJ; Kurtovic, L; Walsh, R; Joe, C; Lovrecz, G; Locarnini, S; Beeson, JG; Netter, HJ

(2019), VACCINE, 1674-1684

DOI: 10.1016/j.vaccine.2019.01.056

Avian influenza in the Greater Mekong Subregion, 2003-2018

Suttie, A; Karlsson, EA; Deng, YM; Hurt, AC; Greenhill, AR; Barr, IG; Dussart, P; Horwood, PF

(2019), INFECTION GENETICS AND EVOLUTION

DOI: 10.1016/j.meegid.2019.103920

Update of the statements on biology and clinical impact of occult hepatitis B virus infection

Raimondo, G; Locarnini, S; Pollicino, T; Levrero, M; Zoulim, F; Lok, AS; Allain, JP; Berg, T; Bertoletti, A; Brunetto, MR; Bruno, R; Chen, DS; Coppola, N; Cornberg, M; Craxi, A; Dandri, M; Di Marco, V; Ferrari, C; Gaeta, GB; Glebe, D; Guidotti, LG; Kramvis, A; Lampertico, P; Li, CY; Liang, J; Marzano, A; Michalak, TI; Pawlotsky, JM; Prati, D; Puoti, M; Samuel, D; Soriano, V; Squadrito, G; Sureau, C; Trepo, C; Yuen, MF

(2019), JOURNAL OF HEPATOLOGY, 397-408

DOI: 10.1016/j.jhep.2019.03.034

Prevalence of baseline HCV NS5A resistance associated substitutions in genotype 1a, 1b and 3 infection in Australia

Papaluca, T; O'Keefe, J; Bowden, S; Doyle, JS; Stoove, M; Hellard, M; Thompson, AJ

(2019), JOURNAL OF CLINICAL VIROLOGY, 84-87

DOI: 10.1016/j.jcv.2019.09.011

Self-collected compared with professional-collected swabbing in the diagnosis of influenza in symptomatic individuals: A meta-analysis and assessment of validity

Seaman, CP; Tran, LTT; Cowling, BJ; Sullivan, SG

(2019), JOURNAL OF CLINICAL VIROLOGY, 28-35

DOI: 10.1016/j.jcv.2019.07.010